BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB002D06LP1|AL424954
(1065 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig948 1966 0.0
>3x_Contig948
Length = 3578
Score = 1966 bits (987), Expect = 0.0
Identities = 1041/1058 (98%), Gaps = 5/1058 (0%)
Strand = Plus / Minus
Query: 1 gatcatccattcgatggcaggagtaaactggcgattacaagtttctgcwaacaaaaacac 60
|||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||
Sbjct: 1538 gatcatccattcgatggcaggagtaatctggcgattacaagtttctgctaacaaaaacac 1479
Query: 61 tttatcgtgaatagataaaatgtcatcagatcttgaatctcttattgacttatcmttaac 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1478 tttatcgtgaatagataaaatgtcatcagatcttgaatctcttattgacttatccttaac 1419
Query: 121 ctttgccc-acagcctattctgtaatcwtaaaatttcgtcgttccaattttccatcgaaa 179
|||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1418 ctttgccccacagcctattctgtaatcttaaaatttcgtcgttccaattttccatcgaaa 1359
Query: 180 tggcattgaatgattcaagaaacaaacacgccaattgatcatggctatatgaaatccgtt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1358 tggcattgaatgattcaagaaacaaacacgccaattgatcatggctatatgaaatccgtt 1299
Query: 240 tagattcccaagttctgtcaatgtttttgctaccctgagcaaattgttgcattgcaataa 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1298 tagattcccaagttctgtcaatgtttttgctaccctgagcaaattgttgcattgcaataa 1239
Query: 300 gtttcaagaactcaaaccgattaatcatgagtacaacaagatcttgtctatgtttcaatt 359
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1238 gtttcaagaactcaaaccgattaatcatgagttcaacaagatcttgtctatgtttcaatt 1179
Query: 360 gcacgatactataccacatctgawatgagaactccggcaggacgtgtgaaawaaaccaga 419
||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||
Sbjct: 1178 gcacgatactataccacatctgatatgagaactccggcaggacgtgtgaaataaaccaga 1119
Query: 420 aatacatccagtttgtaggttttgtattgaaacagtatcgaagcttgatagaaacttcct 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1118 aatacatccagtttgtaggttttgtattgaaacagtatcgaagcttgatagaaacttcct 1059
Query: 480 cmtgaattttgactctgaagtcaccagaaccatttaaattcggtacaaggtttggtccgc 539
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1058 cctgaattttgactctgaagtcaccagaaccatttaaattcggtacaaggtttggtccgc 999
Query: 540 ataatttcgtctcgacgtgtttcttgggtcttcccctcggtttcttcaccaaatttacct 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 998 ataatttcgtctcgacgtgtttcttgggtcttcccctcggtttcttcaccaaatttacct 939
Query: 600 tatgttgtttgatatcacatttattattcgaatgtatcaatttactatactgtcgcaaat 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 938 tatgttgtttgatatcacatttattattcgaatgtatcaatttactatactgtcgcaaat 879
Query: 660 ccataccaacagaggtgttagggttgagattagcacctgtcttagacattatcaatgtca 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 878 ccataccaacagaggtgttagggttgagattagcacctgtcttagacattatcaatgtca 819
Query: 720 gtataaccttaaaagtacccctgtttttttacgtcgaaataagatgctgaatagcaacaa 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 818 gtataaccttaaaagtacccctgtttttttacgtcgaaataagatgctgaatagcaacaa 759
Query: 780 aggaccntggaaaaatatcaatcaattaaattcaagattaataatgtatttcaccttgga 839
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 758 aggaccctggaaaaatatcaatcaattaaattcaagattaataatgtatttcaccttgga 699
Query: 840 tttcagatcaaagacgttaccagttgctgttaacgcgctctattcttgaatattttgtat 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 698 tttcagatcaaagacgttaccagttgctgttaacgcgctctattcttgaatattttgtat 639
Query: 900 ctaatcatcgtgtttttttaagatgaatcattttcgtttttaagtaagtgtgaaagatat 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 ctaatcatcgtgtttttttaagatgaatcattttcgtttttaagtaagtgtgaaagatat 579
Query: 960 atgtscgtcagcaaaaaggcctaattgagtaa-tacaaggaca-caagtgaga-aaaama 1016
|||| ||||||||||||||||||||||||||| |||||||||| ||||||||| | || |
Sbjct: 578 atgtccgtcagcaaaaaggcctaattgagtaattacaaggacaccaagtgagatataaca 519
Query: 1017 aagagatttgggtagatgagggatga-ggatttgacgg 1053
|||||||||||||||||||||||||| |||||||||||
Sbjct: 518 aagagatttgggtagatgagggatgagggatttgacgg 481
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7834
Number of Sequences: 1807
Number of extensions: 7834
Number of successful extensions: 48
Number of sequences better than 1.0e-20: 1
length of query: 1065
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1049
effective length of database: 10,329,639
effective search space: 10835791311
effective search space used: 10835791311
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)